Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNIVTRFAPSPTGFLHIGGARTALFNWLYAKHHGGRFLLRIEDTDRKRSTQEAIDAIINGLKWLGVSYDGEIVYQSKRIERHIEVANLLVEKGKAYCCCCPEDKVAEKKAKAREERKIYKHKCTSVI--PDAKPV-VRFNVPDSQEIIVDDKIYGHIKVNSD-QLDDMVILRSDNTPTYIFAVVVDDHDAGITDIIRGSDHLTNTFKQVLIYQALDFDIPRFAHVPLIHGRDGNKLSKRHGATSVCDYEKMGILPKAMRNYLLRLGWSHGNDEIISN--EQAVKWFNLESIGRSPARLNFKKLEHLNNHYINNMSNEDILTLMLGESTLTNKKKNYLLQGLTELKKRANYLTELLDLAQFYIKDPPFDLSEEAEQVVKSNLDIIKLLASFLSNIGDKNWNKGFLSSQVKEFSKLHSAKISDIYHSLRAPITGVMDAPGIIDIMIILGKDECIRRLQAV |
| 4A91 Chain:A ((7-286)) | ----IGRFAPSPSGELHFGSLIAALGSYLQARARQGRWLVRIEDIDPPREVPGAAETILRQLEHYGLHWDGDVLWQSQRHDAYREALAWLHEQGLSYYCTC-------TRARIQSIGGIYDGHCRVLHHGPDNAAVRIRQQHPVTQ---FTDQLRGIIHADEKLAREDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLFGWKVPDYIHLPLALNPQGAKLSKQ--APALPKGDPRPVLIAALQ-FLGQQAEAHWQDFSVEQILQSAVKNWRLTAVPESAIVNSTFS------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A91.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134206 for 2054 contacts (-65.3/contact) +
2D Compatibility (PS) -29051 + (NN) -12104 + (LL) 11420
1D Compatibility (HY) -16400 + (ID) 4700
Total energy: -185041.0 ( -90.09 by residue)
QMean score : 0.489
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