Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIADRKRSVKQKSDKNNLVGNLDIIKTAGEISLQKGLDFEVIMKALESAIEAVAYQKYGSKSKVVVNIDRSTGEVISYRELKVVDDEPNGEEHNGYGSITLTQAKLIKEDAKVGDTINELLSLNTDLASARIAQQRIAQVIKYEELKKQYEEFKDKVGEIRYGIVKQVEYSDLIIDINGTRAYLPLRNLIGGELFREGDKIKAYIQTVKRSDDGRQIILSRASEGFLEALLSQEIPEIADGLVTVKGIARDAGSRSKVAVFSPDKNIDPVGACVGVKGERIKAIIHELNGEKIDVVHYFSDLGQFVIKAITPAEVSKVIIDE--SENCVELIVAEDQLSLAIGKKGQNVRLA----SELIGWKIEILSTQQESERRNRELSQCSALFAEALNLEEIMGQLLVTEGFSSVEDISNASIKELASIEGFNEDIASELRNRANRYLKAENDRKIEELKSLGMESDVINLPLSIDDKIALSEHGIKTLENIADLSSYEFCSILSSSASDKENLKNTVNSIIMEARKKLGVI |
| 2CXC Chain:A ((20-139)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SITGVTAYRCIVDEENNRLIFLVSEG-----EAGRAIGRGGRLIKLLR-EALGKNIEVVEYSSDLERIVKNLFPGVKIESINVRERNGVKQVVIKVSEDDKGAAIGKGGKNVKRARLVLSKLFGVEKVVIR-------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CXC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64419 for 757 contacts (-85.1/contact) +
2D Compatibility (PS) -12564 + (NN) -3006 + (LL) 29312
1D Compatibility (HY) -4400 + (ID) 1750
Total energy: -56827.0 ( -75.07 by residue)
QMean score : 0.264
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