Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MDENINFETDTTFALIKEAQRRKYKVFAYAPSNLALKLNQPIALAQKVSVDDCNFTSKEDVVINLNEMDIIFIRQDPPFDMRYITTTYILEKTRALVINNPTEMRNCPEKLITSLFPEL----IPPTLITENISMIRDFYHDYRG--IILKPLYSYGGNDVIRIQNENSIQVVVELMITKYKCPVIAQAFCKNVN-KDKRILLLDGQPIGVMKRVPRVSGEIRTNLRLGASFEPVEMNDRDNEICNKIGPELKKRGLIFVGIDIVD----DFLLEINITSPTGVVYINKLYNTSLEKDLWNTFEEKASSHISQPSL |
| 4IWX Chain:A ((19-312)) | SHMKIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPAAS----------SIHYKGRK-----LPHFDAVIPRIGTAITFYGTAALRQFEMLGSYPLNESVAIARARDKLRSMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQAAESVIDAFRG-LNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAK-EGDFRSNLHRGGAASVASITPQEREIAIKAARTM---ALDVAGVDILRANRGPLVMEVN--ASPGLEGIEKTTGIDIAGKMIRWIERHATT------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IWX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130447 for 2175 contacts (-60.0/contact) +
2D Compatibility (PS) -29025 + (NN) 777 + (LL) 2652
1D Compatibility (HY) -10000 + (ID) 2050
Total energy: -168093.0 ( -77.28 by residue)
QMean score : 0.379
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