Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSELAKSTREDIEAKIKKIVLEHIS-KDVEKFNNSSKLSEHGADSLDAVEIIMAAEEEFGIEIPDEDAQKMETMEQIVEYVSNKKNNS
4ETW Chain:B ((3-75))
------------IEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH----
General information:
TITO was launched using:
RESULT:
Template:
4ETW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12088 for 488 contacts (-24.8/contact) +
2D Compatibility (PS) -8008 + (NN) -4213 + (LL) 616
1D Compatibility (HY) -5200 + (ID) 1700
Total energy: -30593.0 ( -62.69 by residue)
QMean score : 0.627
(partial model without unconserved sides chains):
PDB file :
Tito_4ETW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ETW-query.scw
PDB file :
Tito_Scwrl_4ETW.pdb
: