Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYNEKILDHYENPRNVGSLDKNDPSVGTGLVGAPSCGDVMKLQIKVNDKGVIEDAKFKTFGCGSAIASSSLLTEMIKGKTIEDVTKIKNTQIVEELS-L-----------------PPVKVHCSVLAEDAIKAAIHDYQSKHSKNES
2QQ4 Chain:A ((6-138))
ELYREILLDHYQSPRNFGVLPQAT---KQAGGMNPSCGDQVEVMVLLE-GDTIADIRFQGQGCAISTASASLMTEAVKGKKVAEALELSRKFQAMVVEGAPPDPTLGDLLALQGVAKLPARVKCATLAWHALEEALR-----------
General information:
TITO was launched using:
RESULT:
Template:
2QQ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23123 for 885 contacts (-26.1/contact) +
2D Compatibility (PS) -12230 + (NN) -3879 + (LL) 196
1D Compatibility (HY) -4400 + (ID) 1850
Total energy: -45286.0 ( -51.17 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_2QQ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QQ4-query.scw
PDB file :
Tito_Scwrl_2QQ4.pdb
: