Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSNYFALFKIEPAFNISLDELEKKYIELSKTDINER-----QSQNMENINKAYQVLKSPLKRAEHLLNLFGVRSQEDQHNFEILNESMEIREYLLDCNNLQLASGMIDEKIKDCIKNLTNNFAVKNFDEAAMQVLRLKYLYKSFEEIKNETNSNF
3UCS Chain:C ((4-69))
-LKDYYAIMGVKPT--DDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRN----------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3UCS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5655 for 360 contacts (-15.7/contact) +
2D Compatibility (PS) -6521 + (NN) -3652 + (LL) 6876
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -12752.0 ( -35.42 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_3UCS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UCS-query.scw
PDB file :
Tito_Scwrl_3UCS.pdb
: