Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MKLNTLQLENYRNYDEVTLKCHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKELIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVKVNHLEQSRLTQYIGHLNVVLFAPEDLNIVKGSPQIRRRFIDMELGQISAVYLNDLAQYQRILKQKNNYLKQLQLGQKKDLTMLEVLNQQFAEYAMKVTDKRAHFIQELESLAKPIHAGITNDKEALSLNYLPSLKFDYAQNEAARLEEIMSILSDNMQREKERGISLFGPHRDDISFDVNGMDAQTYGSQGQQRTTALSIKLAEIELMNIEVGEYPILLLDDVLSELDDSRQTHLLSTIQHKVQTFVTTTSVDGIDHEI--MNNAKLYRINQGEIIK----
2O5V Chain:A ((2-359))GDVRLSALSTLNYRNLAPGTLNFPEGVTGIYGENGAGKTNLLEAAYLALTGQTDA-PRIEQLIQAGETEAYVRADLQQGGSLSIQEVGLGRGRRQLKVDGVRAR--TGDLPRGGAVWIRPEDSELVFGPPSGRRAYLDSLLSRLSARYGEQLSRYERTVSQRNAALRG------GEEWAMHVWDDVLLKLGTEIMLFRRRALTRLDELAREANAQL-GSRKTLALTLTEST----------SPETYAADLRGRRAEELARGSTVTGPHRDDLLLTLGDFPASDYASRGEGRTVALALRRAELELLREKFGEDPVLLLDDFTAELDPHRRQYLLDLAASVPQAIVTGTELAPGAALTLRAQAGRFTPVADEEMQAEGTA


General information:
TITO was launched using:
RESULT:

Template: 2O5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98427 for 2880 contacts (-34.2/contact) +
2D Compatibility (PS) -37601 + (NN) -7383 + (LL) 1652
1D Compatibility (HY) -12800 + (ID) 4950
Total energy: -159509.0 ( -55.39 by residue)
QMean score : 0.459

(partial model without unconserved sides chains):
PDB file : Tito_2O5V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2O5V-query.scw
PDB file : Tito_Scwrl_2O5V.pdb: