Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVNFQQEEIKVPASILNKSVKGIKLEQITGRSKDFSSKAKGDSDLTTSDGGKLLNANISQSVKVSDNNLKDLKDYVNKRVFKGSEYQLSEINSGSVKYEQTYDNFPILNNSKAMLNFNIEDNKAASYKQSMMDDIKPTDGADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYYSVVNETNVQLLQPNWEIKVKHDGKDKTNTYYVEATNNNPKIINH |
| 3KYS Chain:A ((3-218)) | ----SIGTTKLRLVEFSAFLEQQRDPDSYNKHLFVHIGHLESVDIRQIYDKFP------EKKGGLKELFGKGPQNAFFLVKFWADLNCNIQDAGAFYGVTSQYESSEN----MTVTCSTKVCSF----------GKQVVEKVETEYARFENG--RFVYRINRSPMCEYMINFIHKLKHLPEKYMMNSVLE---------------------NFTILLVVTNRDTQETLLCMACVFEVSNSEHGAQHHIYRLVK--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KYS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 33156 for 1566 contacts (21.2/contact) +
2D Compatibility (PS) -21802 + (NN) -1791 + (LL) 3792
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: 6355.0 ( 4.06 by residue)
QMean score : 0.108
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