Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRLIRMSVLASGST-------GNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARK-----------YQLPIYANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLNEHDIDTEKEVLLCDTDKAIPTPIYTI |
1ZKP Chain:A ((22-267)) | -SNAMKMTVVGFWGGFPEAGEATSGYLFEHDGFRLLVDCGSGVL---AQLQK-YITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFDENGFHSLTH-EPHTKGIPYNPEETLQIGPFSISFLKTVH-PVTCFAMRITAGNDIVVYSADSSYI-PEFIPFTKDADLFICECNMYAHQE-------------AAKAGHMNSTEVASIAKDA---NVKELLLTHLPHTGNPA-DLVTEAKQIFSG-HITLAHSGYVWN------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67227 for 2019 contacts (-33.3/contact) +
2D Compatibility (PS) -23844 + (NN) -752 + (LL) 2724
1D Compatibility (HY) -9200 + (ID) 2350
Total energy: -100649.0 ( -49.85 by residue)
QMean score : 0.449
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