Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKINRYITRGISEYLSLDLQILLWNMVKERDNQPHTDYLHIFKLQEDENILSITHEQEQPAYKLEYHYTNYVKNQNALPKKVYVIREDGVDAFYYVMLLPEEY
1YEL Chain:A ((1-102))
MADTGE-VQFMKPFISEKSSKSLEIPLGFNEYFPAPFPITVDLLDYSGRSWTVRMKKRGEKVFLTVGWENFVKDNNLEDGKYLQFIYDRDRTFYVIIYGHNMC
General information:
TITO was launched using:
RESULT:
Template:
1YEL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23315 for 673 contacts (-34.6/contact) +
2D Compatibility (PS) -10588 + (NN) -563 + (LL) 204
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -39762.0 ( -59.08 by residue)
QMean score : 0.291
(partial model without unconserved sides chains):
PDB file :
Tito_1YEL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YEL-query.scw
PDB file :
Tito_Scwrl_1YEL.pdb
: