Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYFNQSDKFEQLKKKILGISFNLPEGEEFTFHDLNSRANVQCSKAVQQNVGRWFAYFVKHAPRVPFIIIGKDTHGHLVYLKTGPNPHYNSNPSKGGVR
2L01 Chain:A ((1-77))
----MKMLKEKAGALAGQIWEALNGTEGLTQKQIKKATKLKADKDFFLGLG-WLLREDK---------VVTSEVEGEIFVKLVLEHHHHHH-------
General information:
TITO was launched using:
RESULT:
Template:
2L01.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19941 for 498 contacts (-40.0/contact) +
2D Compatibility (PS) -8073 + (NN) -4971 + (LL) 1036
1D Compatibility (HY) -400 + (ID) 550
Total energy: -32899.0 ( -66.06 by residue)
QMean score : 0.319
(partial model without unconserved sides chains):
PDB file :
Tito_2L01.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L01-query.scw
PDB file :
Tito_Scwrl_2L01.pdb
: