Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MLMEKILYQ--TDEFKLKPSGWYKTIPPKKDGG------TEFEI-MLSGPIAFTDRFIDPATRKEKVFLSDLNNIELVEKASILTALQLP--------------SLIEYGFTINEKHIR-------DLGFVLQQMRSTTPLSTIYSGVGMLHTLLGPLISLDQPYFSNEITNSTSIICDNKYDLIPKGNLSEWLQMYKEE-----VHGNLSLELDVLFGVSSL-------VTAFLKYHNNVEFSGTI---------------------FSFTGQSSTGK-----STAAMLAASVAGN------PTKGTENLFRSWNATRNALEGYLSGNYGV---------PIVLDELS--AATFHDTTGLLYSFAEGQGRQRA--NINGDVKTPKN- |
| 4XFK Chain:A ((9-399)) | AEPLKIALVETLSGPQASTGLLYRAAVLYQLGKINEAGGFNGEKIQILEYDNQGGPVGAADRVKAAIADGAQIIVQGSSSAVAGQITEDVRKYNLRNKGKEVLYLNLGAEALELTGSKCHFYHFRFSPNAAIRFKTVAQGMKDKGILGERAYSINQNY---SWGVDVENTVVANAKEIGYEVVDKTLHEVNKIQDFSPYVAKIQAANVDTVFTGNWSNDLLLLMKAASGAGLKAKFATSFLDQPGNIGNAGAIAEGHIVSTPFNPEANGEASMAFAEDYKKVTGHYPSYVEPAAVFGLQLFGEALKNVKPGEGKINTTDIALAIENASVKTPMGDYSMRSDDHQAKFPMVVQEVSKKARIKADGTEYGFLPFKTFTGDESIDPVQESCSMKRPG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XFK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21565 for 2194 contacts (-9.8/contact) +
2D Compatibility (PS) -30763 + (NN) 3110 + (LL) 404
1D Compatibility (HY) -6400 + (ID) 2700
Total energy: -57914.0 ( -26.40 by residue)
QMean score : 0.122
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