Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIPPQRQLAIQYNVNRVTIIKSIELLEAEGFIYTKVGSGTYVNDYLNEAHITNKWSEMMLWSSQQRSQYTVQLINKIETDDSYIHISKGELGISLMPHIQLKKAMSNTASHIEDLSFGYNNGYGYIKLRDIIVERMS-KQGINVGRENVMITSGALHAIQLLSIGFLGQDAIIISNTPSYIHSTNVFEQLNFRHIDVPYNQINEINTIIDRFIN---------FKNKAIYIEPRFNNPTGRSLTNEQKKNIITYSERHNIPIIEDDIFRDI-FFSDPTPAIKTYDKLGKVIHISSFSKTIAPAIRIGWIVASEK-IIEQLADVRMQIDYGSSILSQMVVYEMLKNKS-YDKHLVKLRYVLKDKRDFMLNILNNLFKDIAHWEVPSGGYFVWLVFKIDIDIKYLFYELLSKEKILINPG-YI-YGS-KEKSIRLSFAFESNENIKHALYKIYTYVKKV |
| 3AOW Chain:A ((75-444)) | --------------------------------------------------------------------------------TSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGISQ-DNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDD---EGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVG-DPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVD-GGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGIDSKKMLERA-IKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AOW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228299 for 3100 contacts (-73.6/contact) +
2D Compatibility (PS) -38394 + (NN) -18587 + (LL) 7048
1D Compatibility (HY) -23600 + (ID) 4250
Total energy: -306082.0 ( -98.74 by residue)
QMean score : 0.481
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