Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MINQSIWRSNF-------RILWLSQFIAIAGLTVLVPLLPIYM---ASL------QNLSVVEIQLWSGIAIAAPAVTTMIASPIWGKLGDKISRKWMVLRALLGLAVCLFLMALCTTPLQFVLVRLLQGLFGGVVDASSAFASAEAPAED--RGKVLGRLQSSVSAGSLVGPLIGGVTAS------ILGFSALLMSIAVITFIVCIFGALKLIET------THMPKSQTPNINKGIRRSFQCLLCTQQTCRFI----IVGVLANFAMYGMLTALSPLASSVNHTAIDDRSVIGFLQ-----SAFWTASILSAPLWGRFNDKS-------YVKSVYIFATIACGCSAILQGLATNIEFLMAAR---ILQGLTYSALIQSVMFVVVNACHQQLKGTFVGTTNSMLVVGQIIGSLSGAAITSYTTPATTFIVMGVVFAVSSLFLICSTITNQINDHTLMKLWELKQKSAK---------------------------- |
| 4IKW Chain:A ((3-494)) | SIDKQQIAASVPQRGFFGHPKGLFTLFFTEFWERFSYYGMRAILVYYMYYEVSKGGLGLDEHLALAIMSIYGALVYMSGIIGGWLADRVFG------TSRAVFYGGLLIMAGHIALAIPGGVAALFVSMALIVLGTGLLKPNVSSIVGDMYKPGDDRRDAGFSIFYMGINLGAFLAPLVVGTAGMKYNFHLGFGLAAVGMFLGLVVFVATRKKNLGLAGTYVPNPLTPAEKKKAAAIMAVGAVVIAVLLAILIPNGWFTVETFISLVGILGIIIPIIYFVVMYRSPKTTAEERSRVIAYIPLFVASAMFWAIQEQGSTILANYADKRTQLDVAGIHLSPAWFQSLNPLFIIILAPVFAWMWVKLGKRQPTIPQKFALGLLFAGLSFIVILVPGHLSGGGLVHP--IWLVLSYFIVVLGELCLSPVGLSATTKLAPAAFSAQTMSLWFLSNAAAQAINAQLVRFYTPENETAYFGTIGGAALVLGLILLAIAPRIGRLMKG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -358310 for 3280 contacts (-109.2/contact) +
2D Compatibility (PS) -41022 + (NN) 71 + (LL) 232
1D Compatibility (HY) -28400 + (ID) 3600
Total energy: -431029.0 ( -131.41 by residue)
QMean score : 0.221
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