Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEIVKSPRILDEVSKDLNDKYSPSKLSSMLTITNQE-NTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKADGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN |
2LAK Chain:A ((1-160)) | MEKAMPESFVVRREAHLAAPPAAVFALMTDPEKILRWM--------GTEAEVEPEPGGLYLVNVTGARFA---RGSFREVVPVHRLAYSFGWDGSEVVPPGSSLVEIDLIEQGGGTLLRLTHSGLPSAEQCAGHEEGWAHYLGRLTEVAAGRDPGPDPFYGRRLEHH----------------------------------------------------HHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LAK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14400 for 1015 contacts (14.2/contact) +
2D Compatibility (PS) -16751 + (NN) 1576 + (LL) 5880
1D Compatibility (HY) 4400 + (ID) 850
Total energy: 8655.0 ( 8.53 by residue)
QMean score : 0.166
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