Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKKENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRLLVTSEKPGAGKSTVVSNVAITYAQAGYKTLVIDGDMCKPTQNYIFNEQ-NNNGLSSLIIGRTTMSEAITSTEIENLDLLTAGPVPPNPSELIGSERFKELVDLFNKRYDIIIVDTPPVNTVTDAQLYARAIKDSLLVIDSEKNDKNEVKKAKALMEKAGSNILGVILNKTKVDKSSSYYHYYGDE |
1G3Q Chain:A ((2-177)) | ----------------------------------------GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLGVDDPDVTLHDVLAGEANVEDAIYMTQFDNVYVLPGAVDWEHVL-KADPRKLPEVIKSLKDKFDFILIDCPAGLQLD-AMSAMLSGEEALLVTNPEISCLTDTMKVGIVLKKAGLAILGFVLNRYGRSD----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1G3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -60881 for 1544 contacts (-39.4/contact) +
2D Compatibility (PS) -18817 + (NN) -8011 + (LL) 2636
1D Compatibility (HY) -9200 + (ID) 2000
Total energy: -96273.0 ( -62.35 by residue)
QMean score : 0.507
|
|
|