Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKLKLMTIVGTRPE-IIRLSSTIKACDQY-FNQILVHTGQNYDYTLNQIFFDDLELRQPDHYLEAVGSNLGETMGNIIAKTYDVLLREQPDALLILGDTNSCLAAVSAKRLKIPVFHMEAGNRCFDQNVPEEINRKIVDHVSDVNLPYTEHSRRYLLDEGFNKANIFVTGSPMTEVIEAHRDKINHSDVLNKLGLEPQQYILVSAHREENIDNEKNFKSLMNAINDIAKKY-KMPVIYSTHPRSWKKIEESKFEFDPLVKQLKPFGFFDYNALQKDAFVVLSDSG-TLSEESSILKFPGVLIRTST-----ERPEVLDKGTVI-VGGIT---YNNLIQSVELAREMQNN-NEPMI----DAIDYKDTNVSTKVVKIIQSYKDIINRNTWRK |
| 3S2U Chain:A ((3-355)) | ---GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIE--ND--LVPKAGLP--LHLIQ-----APLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAVAGT------AN-RSLAPIARRVC-------EAFPDTFPA---RLTTGNPV-RGELFLDAH-----ARAPLT-GRRVNLLVLGGSLGA---EPLNKLLPEALAQVPLEIRPAIRHQ-AGRQHAEITAERYRTVAVEADVAPFI--SDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVP---DDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACLEVA-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93756 for 2744 contacts (-34.2/contact) +
2D Compatibility (PS) -32750 + (NN) -3514 + (LL) 2872
1D Compatibility (HY) 400 + (ID) 1900
Total energy: -128648.0 ( -46.88 by residue)
QMean score : 0.313
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