Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILNIVSSNIVQDPRVLKQIETIKGV--TNDYKIVGMNNSQATN-RR--LENL-DCNYRLLGSKVDPKNILSKLIKRIRFATGVIREIKAFKPDVIHANDFDV-LLMVYLSNYK-KANIVYDAHEIYAKNAFINKVPLISKFVESIEKHIVKHRVNAFVTVSHAAKEYYQSKGYK-KEANVITNA-PILNDSREF--------KEIENFKEIVYQGQIVMD--RGYEEFIIASSAFKQ--NAPSFIIRGFGPHEEVIKELIS--YNSENIRLDKPVEVKELVDKLAESNVGVILTKPVSINFEYTVSNKIFECIHAGLPVILS-PVKEHIYLNEKYKFGIVLKEVTPLEIEKAVRKLRDNHDLFNHLRQNAIKASKILNWQIESERLVELYKF |
| 3OT5 Chain:A ((28-393)) | IKVMSIFGT-RPEAIKMAPLVLALEKEPETFESTVVITA-----LDQVLEIFDIKPD-IDLDIMK---GQTLAEIT--SRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLRTWNKYS---PF---PEEMNRQLTGV-MADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHHPILENLGDNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNP-AVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTD------S-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAGTLK-LIGT-NKENLIKEALDLLDNKESHDKMAQAANPYGDGFAANRILAAIKSHFE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107723 for 2876 contacts (-37.5/contact) +
2D Compatibility (PS) -35717 + (NN) -8976 + (LL) 2196
1D Compatibility (HY) 2000 + (ID) 2150
Total energy: -150370.0 ( -52.28 by residue)
QMean score : 0.405
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