Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMHRGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKYDQILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVYKNAENVIVLG-TEMKNYLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFK----AY-REQYDKILLYSGNMGQLQDMETLISFLKLNKD-QPQTLTILCGHGKK----F-ADVKTAIEDHRI-ENVKMFEF---LTGTDYADVLKIADVCIASLIKEGVGLGVPSKNYGYLAAKKPLVLIMDKQSDIVQHVEQYDAGIQIDNGDAHAIYNFINTH--SSKELHEMGERAHQLFKDKYTREINTMKYYNLLK |
| 2X6Q Chain:A ((39-412)) | -KGRSFVHVNST--SFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEF----FN---VTKTFHN-ALQGNES--LKLTEEMKELYLNVNRENSKFIDLSSFDYVLVHDPQPA-ALI-EFY--EKKSPWLWRCHIDLSSPN---------R---EFWEFLR-RFVEKYDRYIFHLPEYVQPEL-----D--RNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTV----TEAMWKGKPVIGRA--VGGIKFQIVDGETGFLVR--DANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHMERYLDILN |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203951 for 2928 contacts (-69.7/contact) +
2D Compatibility (PS) -37488 + (NN) -8416 + (LL) 1488
1D Compatibility (HY) -14000 + (ID) 2200
Total energy: -264567.0 ( -90.36 by residue)
QMean score : 0.421
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