Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFSQNLFRCPTPTCIVCRNWESNFSLLGPTPQLALPVEFLFEILCVGAPD---
1P9C Chain:A ((263-307))
MTISQQEFG---------RTGLPDLSSMTEEEQIAYAMQMSLQGAEFGQAESAD
General information:
TITO was launched using:
RESULT:
Template:
1P9C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1955 for 173 contacts (11.3/contact) +
2D Compatibility (PS) -4037 + (NN) 1561 + (LL) 388
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -1783.0 ( -10.31 by residue)
QMean score : -0.001
(partial model without unconserved sides chains):
PDB file :
Tito_1P9C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P9C-query.scw
PDB file :
Tito_Scwrl_1P9C.pdb
: