Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLETLIKEQLDPHLVEVDEGTYYPRTFIQQLFVDGYFGEA---------ALRKNAEVIEAVSQSCLTTGFCLWCQL-AFSTYLENATQPHLNNDLQQQLLSGEILGATGLSNPMKSFNDLEKLNLEHTYV--DGQLVVSGRMPAVSNIQEDHYFGAISKHESSDEFVMFILRANQDGITLVEKTNFLGVNGSATYQITLNQVVVPQSQIITHDAKQFA--ATIRPQFIAYQIPIGLGSIKSSLELIDAFSNAQNGI------NQYLEYDVEAFKKRYRQLREEYYAILD-DGNLTSHLSELISLKKDIGYLLLDVNQASVVNGGSRAYTPYSPQVRKLKEGFFFAALTPTLRHLGKLEAELKG |
| 1SIQ Chain:A ((23-381)) | DTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTIKGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPN-SGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED-GCIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGAS-SLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHACLQLGRLKDQDKAAPEMVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177742 for 2945 contacts (-60.4/contact) +
2D Compatibility (PS) -36473 + (NN) -15756 + (LL) -8
1D Compatibility (HY) -4400 + (ID) 2400
Total energy: -236779.0 ( -80.40 by residue)
QMean score : 0.362
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