Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIHFLGQASYENDMNIVKDQLENAGFNVKMNIQPDYGSYRTQRQAGNYDIQIDDWMTVFGDPNYAMTALFSSTGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAPLYGSKKNLVYDNKVLDKNSVGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTLDPIR--SI--APSVYSINMNMYTRLLLLDENDHLTTKGSLSRDYAVNKDN-------------KAFYFLLRDDDYFAKVVNGQARNTGERVSAEDVKFSLDRARDKKSVPNNNTYNMHKHINDIKILKDEDIDQLRKEKDKDDKSIYDKLIKAYNVKSLTTDGQKVNNKDGIYQIVKITTDQSMPREVNYLTHSSAGILSKKFVNQVNQEY-PK-----GYGDS-------STIPA--N---SDGKNALYASGAYIMTQKN-AYQATFQRNPGFNETEKGSYGSPKIKNITLKFNGDPNNALSELRNHSIDMLADVNQK--H---FDLIKS-DKNLSIIRKNGRKSVFLMLNIKK------GIFKTHPNLRQAVVNAIDQDQFIK-FYRGDKFKIASPITPLVDTGN----EQRQDLEKVEKAINQ |
| 2D5W Chain:A ((3-383)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PQDNSLVIGA-SQEPRVLAGDFLRVISNQAIKSEIEQYLFAPFIGFNADSQNF--PVLATEVPTLENGRLRVTDIGGGKKRLEMDITIRPDAKWS---------DGRPITTEDVAFYFEVGKAKGMPVLN--P-DFWERVNVRIKD-------------------------------------------AR-NFTLIFEPAYY-YDTYGP--INTYAPKHIMGPEWERVKAAARGLDPDKDAEKLNELYRNFFLKFATPQALNRGAMVYSGPFKLKRWVPGNSIEMERNPNFPIKPEG-GESKYVQKVVYRFIQNTNSLLVAVIGGSIDATSSVSLTFDQGRSPQLVRRAPGRFDIWFVPGAIWEHIDINKFENCQVVKDLGLNDKRTRQAILHALNREGLVKAFFDGLQPVAHTWIAPVNPLFNPNVKKYEFDLKKAEALLAE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2D5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -23092 for 2224 contacts (-10.4/contact) +
2D Compatibility (PS) -34295 + (NN) -11285 + (LL) 14668
1D Compatibility (HY) -10000 + (ID) 2700
Total energy: -66704.0 ( -29.99 by residue)
QMean score : 0.359
|
|
|