Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MASLKNKHFMIGLSLTFIVALFSFL--AAKLPILDKVGALTIAILIAILYRHFRGYPEQYSSGITFSSKYLLRFA-----------IILYGLKLNIFDIIGQGSKLLAIDVG--------VVIFSIVMMLF---------VNKLLHGDKNIAL--LLGVGTGVCGAAAIAAVAPIFKSREKDT------AISIGIIALIGTIFSL------------IYTAIYAIFSMTTNVYGA-WS-GVSLHEIAHVVLAGGFGGSDALKIALLGKLGRVFLLIPLTIVLILIMRFRSSESSSKGRISIPYFLIGFVIMALVNTYVTIPSVLLN-ILNTISTICLLMAMVALGLNVAFKDL-----------KNRALKPLMTIIITSICLSSLA---------FIVVHWL-YS |
| 4KKI Chain:A ((24-434)) | EICEVSEENYIRLKPLLNTMIQSNYNRGTSAVNVVLSLKLVGIQIQTLMQKMIQQIKYNVKSRLSDVSSGELALIILALGVCRNAEENLIYDYHLIDKLENKFQAEIENMEAHNGTPLTNYYQLSLDVLALCLFNGNYSTAEVVNHFTPENKNYYFGSQFSVDTGAMAVLALTCVKKSLINGQIKADEGSLKNISIYTKSLVEKILSEKKENGLIGNTFSTGEAMQALFVSSDYYNENDWNCQQTLNTVLTEISQGAFSNPNAAAQVLPALMGKTFLDINKD----------SSCVSASGNFNIQSYISVNYSVRINETYFTNVTVLNGSVFLSVMEKAQKMNDTIFGFTMEERSWGPYITCIQGLCANNNDRTYWELLSGGEPLSQGAGSYVVRNGENLEVRWSKYL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4KKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -336085 for 2309 contacts (-145.6/contact) +
2D Compatibility (PS) -32989 + (NN) 2620 + (LL) 1696
1D Compatibility (HY) -8800 + (ID) 3250
Total energy: -376808.0 ( -163.19 by residue)
QMean score : 0.234
|
|
|