Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQAYLGLGSNIGDRESQLNDAIKILNEYDGISVSNISPIYETAPVGYTEQPNFLNLCVEIQTTLTVLQLLECCLKTEECLHRIRK-ERWGPRTLDVDILLYGEEMIDLPKLSVPHPRMNERAFVLIPLNDIAANVVEPRSKLKVKDLVFVDDSVKRYK
3UD5 Chain:A ((3-142))
---AYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEM----------------
General information:
TITO was launched using:
RESULT:
Template:
3UD5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108405 for 1020 contacts (-106.3/contact) +
2D Compatibility (PS) -14435 + (NN) -4622 + (LL) 1800
1D Compatibility (HY) -11600 + (ID) 2850
Total energy: -140112.0 ( -137.36 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_3UD5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UD5-query.scw
PDB file :
Tito_Scwrl_3UD5.pdb
: