Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDVANKEAFIDIGGMHARAKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYA-GLTACYLLVNKAIRRGYKSMPEHVNMMDKSMKHHIIIDQIGDENKAILKDFLMNHDEGMWKLSSDALHQAFN
1QEZ Chain:A ((63-140))
---------------------------------------------------------------------------GDPLDVLVITNYQLYPGSVIEVRPIGILYMKD-EEGEDAKIVAVPKDKTDPSFSNIKDINDLPQATKNKIVHFFEHYKE---------------
General information:
TITO was launched using:
RESULT:
Template:
1QEZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14159 for 401 contacts (-35.3/contact) +
2D Compatibility (PS) -7588 + (NN) 2349 + (LL) 4936
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -17312.0 ( -43.17 by residue)
QMean score : -0.042
(partial model without unconserved sides chains):
PDB file :
Tito_1QEZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QEZ-query.scw
PDB file :
Tito_Scwrl_1QEZ.pdb
: