Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLE-----DMGYFCVDNLPPVLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIID-VMFLEASTEKLISRYKE----TRRAHPLMEQGKRS--LINAINDEREHLSQIRSIANFVID--TTKLSPKELKERIRRYYEDEEF-ETFTINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDLLDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESGEKK |
| 1Z47 Chain:A ((31-220)) | VRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPP----------QKRNVGLVFQNYA--LFQHM-TVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVL---------LFDEPFAAIDTQ-IRRELRTFVRQVHDEMGVTSVFVTHDQE-EALEVADRVLVLH-------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5061 for 1250 contacts (4.0/contact) +
2D Compatibility (PS) -18890 + (NN) -4988 + (LL) 8864
1D Compatibility (HY) -6400 + (ID) 1500
Total energy: -17853.0 ( -14.28 by residue)
QMean score : 0.225
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