Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFFFATSCLVLTLVVVSSLSSSANASQTDNGVNRSGSEDPTVYSATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLL-VDTPETKHPKKGVEKYGPEASAFTKKMVENANKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQLLRKSEAQAKKEKLNIWSEDNADSGQ
1STB Chain:A ((6-142))
------------------------------------------------------------------------------------KLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQHLRKSEAQAKKEKLNIWS--------
General information:
TITO was launched using:
RESULT:
Template:
1STB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27227 for 1065 contacts (-25.6/contact) +
2D Compatibility (PS) -14346 + (NN) -2239 + (LL) 5904
1D Compatibility (HY) -15600 + (ID) 6700
Total energy: -60208.0 ( -56.53 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_1STB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1STB-query.scw
PDB file :
Tito_Scwrl_1STB.pdb
: