Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFREQVLNLLAEVAENDIVKENPDVEIF-EEGIIDSFQTVGLLLEIQNKLDIEVSIMDFDRDEWATPNKIVEALEELR
2CGQ Chain:A ((3-71))
----EAINATIQRILRTDR-GITANQVLVDDLG-FDSLKLFQLITELEDEFDIAISFRDAQN--IKTVGDVYTSVAV--
General information:
TITO was launched using:
RESULT:
Template:
2CGQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24776 for 434 contacts (-57.1/contact) +
2D Compatibility (PS) -7080 + (NN) -2721 + (LL) 1244
1D Compatibility (HY) -4800 + (ID) 600
Total energy: -38733.0 ( -89.25 by residue)
QMean score : 0.718
(partial model without unconserved sides chains):
PDB file :
Tito_2CGQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CGQ-query.scw
PDB file :
Tito_Scwrl_2CGQ.pdb
: