Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEPKQFDSKAAYEQHLVTLLNKDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDCGMDTGEIIEQRQCDIRPDDSKEQLEEKVKKLEYELYPSVIAKIVK
1C2T Chain:B ((1-182))
-MNIVVLISGNGSNLQAIIDACKTNKIKGT-VRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAIYPLVIS----
General information:
TITO was launched using:
RESULT:
Template:
1C2T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122641 for 1477 contacts (-83.0/contact) +
2D Compatibility (PS) -20164 + (NN) -15957 + (LL) 836
1D Compatibility (HY) -16400 + (ID) 3000
Total energy: -177326.0 ( -120.06 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_1C2T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C2T-query.scw
PDB file :
Tito_Scwrl_1C2T.pdb
: