Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKVSDLRLKYPNGQRKIFDHLNITIQDKEKVLLLGPSGCGKSTLLNVLSGIVPNLIELPMKYDELIVDP-------LS--------------GVIFQDPDSQFCMPKVYEELAFVLENRQVPREDMDALIINALNMVNLNVTPETYIKDLSGGMKQKLAIVETILQQSKTLFLDEPTAMLDVQATEDLWTKLIELWED-QTVVIVEHKVKHIWNHVDRVILMDYNGNIIADECPEIILQ---KYVHLLS-EYG---V-WHPRAWEFAPSRVDFPTTNSHLLQFKNGRIIRGKSTLLSFSDLEIGLGEWITITGANGSGKTTLLESIMQLIKY-QGDVYFENQRLTKIKHAAKHMYLVYQNPELQFITNSVYDEINIHFNHLSKDQSDDETIQLLKLLDLQNVKDQHPYELSIGQKRRLSVATALSSKADIIFLDEPTFGLDSHNTFQLIKLFQKRIN-LGQSIVMVTHDDEIIERYPSRRLKISDGALLDCDGDTNV |
| 1YQT Chain:A ((25-479)) | ----EDCVHRYGVN-AFVLYRLP-VVKEGMVVGIVGPNGTGKSTAVKILAGQLIPNLC---GDNDSWDGVIRAFRGNELQNYFEKLKNGEIRPVVKPQYV--DLIPKAVKGKVIELL-----KKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEP--GVYGIFSQPKGTRNGINEFLRGYLKDENVRFRPYEIKFTKTGERVEIERETLVTYPRLVKDYGS-FRLEVEPGEIKKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKIEWDL-----------TVAYKPQYIK-ADYEGTVYELLSKIDASKL--NSNFYKTELLKPLGIIDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLMVFEGEP---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1YQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -219376 for 3489 contacts (-62.9/contact) +
2D Compatibility (PS) -44895 + (NN) -12052 + (LL) 3148
1D Compatibility (HY) -17600 + (ID) 4650
Total energy: -295425.0 ( -84.67 by residue)
QMean score : 0.357
|
|
|