Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYVMDMGKAYEATVSIGRSTTTEDQTGDTLETKGVHSADFNKDDIDRLLENFKGVIEQIPPMYSSVKVNGKKLYEYARNNETVERPKRKVNIKDIGRISELDFKENECHFKIRVICGKGTYIRTLATDIGVKLGFPAHMSKLTRIESGGFVLKDSLTLEQIKELH-------EQDSLQNKLFPLEYGLKGLPSIKIKDSHIKKRILNGQKFNKNEFDN-----KIKDQIVFIDDDSEKVLAIYMVHPTKESEIKPKKVFN |
| 2APO Chain:A ((65-322)) | -KYGVVVVDKPRGPTSHEVSTWVKKILNLDKAGHGGTLDPKVTGVLPVALERATKTIPMWHIPPKEYVCLMHLHRD--------------------ASEEDILRVFKEFTGRIYQR----------------------------RIRKIHELELLDKD---G--KDVLFRVKCQSGTYIRKLCEDIGEALGTSAHMQELRRTKSGCFEEKDAVYLQDLLDAYVFWKEDGDEEELRRVIKPMEYGLRHLKKVVVKDSA-VDAICHGADVYVRGIAKLSKGIGK-GETVLVETLKGEAVAVGKAL-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2APO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154242 for 1841 contacts (-83.8/contact) +
2D Compatibility (PS) -25127 + (NN) -7407 + (LL) 3248
1D Compatibility (HY) -11200 + (ID) 3950
Total energy: -198678.0 ( -107.92 by residue)
QMean score : 0.519
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