Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTVLFVGLGLIGGSLASNIKYHNPN----TNIIAYDADTS--QLDKAKSIGIINEKCLNYSEAIKKADVIIYATPVAITNKYLSELIDMPTKPGVIVSDTGSTKAMIQQHESNLLK---HNIHLVSGHPMAGSHKSGVLNAKKHLFENAYYILVYNEP-RNEQAANTLKELLSPTLAKFIVTTAEEHDYVTSVVSHLPHIVAS---SLVHVSQKNGQEHHLVNKLAAGGFRDITRIAS---SNAQMWKDITLSNKTYILEMIRQLKSQFQDLERLIESNDSEKLLSFFAQAKSYRDALPAKQLGGLNTAYDLYVDIPDESGMISKVTYIMSLHNISISNLRILEVREDIYGALKISFKNPTDRERGMQALSDFDCYIQ |
2IZZ Chain:A ((22-267)) | SMSVGFIGAGQLAFALAKGFTAA--GVLAAHKIMASSPDMDLATVSALRKMGVKL--TPHNKETVQHSDVLFLAVKPHIIPFILDEIGA-DIEDRHIVVSCAAGVT--ISSIEKKLSAFRPAPRVIRCMTNTPVVVR----------EGA-TVYATGTHAQV-EDGRLMEQLLSSVGF-CTEVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLHSEQHPGQLKDNVSSPGGATIHALHVL----------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2IZZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -98243 for 1741 contacts (-56.4/contact) +
2D Compatibility (PS) -24708 + (NN) -11243 + (LL) 9292
1D Compatibility (HY) -2800 + (ID) 1950
Total energy: -129652.0 ( -74.47 by residue)
QMean score : 0.423
|
|
|