Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYHFNKIYFLRISTLPLSLGQESCVIRIVPQFFQQQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLNVISIEDPVEMQIPG----IVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAILRLLEMGISV------QELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNH------------SLPSSFKNLEDKLDDMTKAGVICETTMDKYI |
2EYU Chain:A ((19-241)) | --------------------------------------------------------------------------------------------------------------------------ELCHRKMGLILVTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVGE-DTKSFADALRAALREDPDVIFVGEMRDLETVETALRAAETGHLVFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVLAYGLLIPNTAIRNLIRENKLQQVYSLMQSGQAETGMQTMNQTLYKLYKQGLITLEDAMEAS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2EYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -134665 for 1579 contacts (-85.3/contact) +
2D Compatibility (PS) -22261 + (NN) -10659 + (LL) 10336
1D Compatibility (HY) -10000 + (ID) 3050
Total energy: -170299.0 ( -107.85 by residue)
QMean score : 0.457
|
|
|