Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLYTSYGTYGFLHQIKINNPTHQLFQFSASDTSVIFEETDGETVLKSPSIYEVIKEIGEFSEHHFYCAIFIPSTEDHAYQLEKKLISVDDNFRNFGGFKSYRLLRPAKG-TTYKIYFGFADRHAYEDFKQSDAFNDHFSKDALSHYFGSSGQHSSYFERYLYPIKE
3HX9 Chain:A ((3-76))
------------------------------------------------------------------VVKINAIEVPAGAGPELEKRFAHRAHAVENSPGFLGFQLLRPVKGEERYFVVTHWESDEAFQAWANGPAIAAHA----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HX9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28551 for 416 contacts (-68.6/contact) +
2D Compatibility (PS) -7860 + (NN) -3928 + (LL) 5552
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -38837.0 ( -93.36 by residue)
QMean score : 0.764
(partial model without unconserved sides chains):
PDB file :
Tito_3HX9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HX9-query.scw
PDB file :
Tito_Scwrl_3HX9.pdb
: