Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDEAKFVLLQLYSIYLGRIDEGMSKHSASYFGSDESSFNAFFLGFNFEDYIDAVLELKHRDFVIASA----EDGGFLEMALSREGIAYSESESKKDYKTLMGLIRDLKKLII
3HHH Chain:A ((43-90))
--------------------------------------------EIVEGTVYTILLRLEKNQWVIAEKKPSE--PMRKFYRLTSSGEAELAD---------------------
General information:
TITO was launched using:
RESULT:
Template:
3HHH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11433 for 195 contacts (-58.6/contact) +
2D Compatibility (PS) -4629 + (NN) -1638 + (LL) 4868
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -15632.0 ( -80.16 by residue)
QMean score : 0.194
(partial model without unconserved sides chains):
PDB file :
Tito_3HHH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HHH-query.scw
PDB file :
Tito_Scwrl_3HHH.pdb
: