Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METGKSDVLDKIEKINKKDSALQEIIPKGYEIEHHQCGVALYQLIPSKKEGEPDKKVFITNTIPQITERFEDIESNEVSFNMLFYDNKTPVNIAVSAEEISDSRQLLKLVNKKLDVTSSTSTKLVDYINVSKRYNPPLNVKVATRLGHVKGYFIYPYQEVMKDSNVKLFSNDKGFQKLIDSFRSKGTLQGYSKKVFAQIKDLPMVMVMLYASLGSVLLREFGLQPFIVEISGSTSTGKTFTLNLVSSVWGTSDLITTWSSTQNSIESMASFLNSFPMFKDDTRNTHPKFVTSTTYNFSSGESKSRSNINLTLNAKKEWRNILISTGESSIANMADEKAGVSARVVTLQDPPYPDNFDFTTLDKSFRENYGTLGLAFIKQYESKKDVYKNAFESYQRYFNQKGSNEIMQRLGRAFALLQVTGEVLNDIDGFEHDHFKIIEQ--AYDSMVKNNKTIDKPKQLLEELLQYLDAN-RNNIVGDGYDS-VNYGDVKAVYKHDFLCIKNETVKNKLGHEMQTITGQWDKKGYLIKDKKRIQKQVKHKSQRHLGYAIKKEIIEELGFDFSISHNPYTESY--- |
| 4NLE Chain:A ((18-485)) | ------TIPNVLANRYASDEMVAIWSPEAKIIAERRLWLAVLRAQAELGVAVPDG----------VVEDYERVLEN-VDLESIAARERVRHDVKARIEEFNAHEH----VHKGM--TSRDLTENVEQLQIRQSLELVFSHGVAV-VARLAERAVVYRDLVMAGRSHNVAAQATT----------------LGKRFASAAEETLVALTRLRELIDRYPLR--GVK-------GPMGTA--------------QDMLDLFGGDVGKLADLERRVAEFLGFTEVFT--------------SVGQVYPRSLDHDVLSALVQF-----GAGPSSMAHTIRLMAG--HELVTEGFAPGQVG------SSAMPHKMNTRSCERVNGLQVVLRGYASMAAELAG--AQWNEGDVFCSVVRRVAL----PDAFFAIDGQTETFLTVLDEFGAY------------PAVIQRELDRYLPFLATTRILMAAVRAGVGREAAHEVIKEHAVAVALAMREQ--GREPD-LIDRLAGDPRLPLDKVALEAALED-KQAFTGAAGDQVDGVVAAVGELVSRYPEAAKYTSG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NLE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 65525 for 3634 contacts (18.0/contact) +
2D Compatibility (PS) -46415 + (NN) 1120 + (LL) 8044
1D Compatibility (HY) -13600 + (ID) 3900
Total energy: 10774.0 ( 2.96 by residue)
QMean score : 0.153
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