Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MDFSNFFQNLSTLKIVTSILDLLIVWYVL-------------YLLITVFKGTKAIQLLKGILVIVI--GQQISMI--------LNLTATSKLFDIV-------IQWGVLALIVIFQPEIRRALEQLGRGSFLKRYTSNTYSKDEEKLIQSVSKAVQYMAKR----RIGALIVFEKETGLQDYIET-----GIAM--DSNISQELLINVFIPNTPLHDGAMIIQGTKIAAAASYLPLSDSPKIS--KSLGTRHRAAV-----GISEVSDAFTVIVSEETGDISVTFDGKLRRDISNEIFEELLAEHWFGTRFQKKGVK-- |
| 4CFP Chain:A ((15-341)) | DTNGFDILMGQFAHNIENIWGFKEVVIAGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRRAIIKTLLMGDDPSSVDLYSDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLLKNRLKSRSNGLRIIYSVTINMVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTQSSFNPYAVSRSDALGLMQVVQHTAGKDVFRSQGKSGTP-SRSFLFDPASNIDTGTAYLAMLNNVYLGGIDNPTSRRYAVITAYNGGAGSVLRVFSNDKIQAANIINTMTPGDVYQTLTTRHPSAESRRYLYKVNTAQKSYRRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114060 for 1932 contacts (-59.0/contact) +
2D Compatibility (PS) -28048 + (NN) -3288 + (LL) 176
1D Compatibility (HY) 800 + (ID) 1900
Total energy: -146320.0 ( -75.73 by residue)
QMean score : 0.199
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