Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKVYVAGAIPEVGLKLLQE--HFEVEMYEGKGLVDKDTLIKGVKNATALISLLSTNVDKDVIDA-GKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVARRARAFDMD-VLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTVYLINASRGPIVHEQALVQALKDNEIEGAALDVYEFEPDITD-DLKSLNNVVLTPHIGNATFEARDMMSKIVANAAISAVQGEKPQFVVN |
| 2GCG Chain:C ((8-322)) | LMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGE------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GCG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195542 for 2568 contacts (-76.1/contact) +
2D Compatibility (PS) -34175 + (NN) -19399 + (LL) 480
1D Compatibility (HY) -25200 + (ID) 5650
Total energy: -279486.0 ( -108.83 by residue)
QMean score : 0.612
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