Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKFNVENEHVEVEIEKLYKFSPELVYEAWTKKDLLKQWFMTSARTNKEIEADVKEGGKYRIVDQQRN-GKVNVIEGIYESLVMDEYVKMTIGMPGLS--ETQDVIEVEFFERETGGTQMLFYYRSLVEKERRFTNLEYKQKKKEYHDAMVHGFELMFDKMYHVIETSTQQ
1XUV Chain:A ((18-169))
------EPGKQEIIITREFDAPRELVFKAFTDPDLYTQWIGPRGFTTALKIFEPKNGGSWQYIQK-DPEGNEYAFHGVNHDVTEPERIISTFEFEGLPEKGHVILDTARFEALPGDRTKLTSHSV-FQTIEDR---------DGMLQSGMEEGINDSYERLDELLEKMK--
General information:
TITO was launched using:
RESULT:
Template:
1XUV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15502 for 999 contacts (-15.5/contact) +
2D Compatibility (PS) -15120 + (NN) 411 + (LL) 1500
1D Compatibility (HY) 1200 + (ID) 1300
Total energy: -28811.0 ( -28.84 by residue)
QMean score : 0.360
(partial model without unconserved sides chains):
PDB file :
Tito_1XUV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XUV-query.scw
PDB file :
Tito_Scwrl_1XUV.pdb
: