Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATQDPRTKFKTTEYEKQEQEVPGLQSEMTPAPDCGETSYQGHQRLQGYKMLVTGGDSAIGRAAAIAYAKEGADVAINYLPSEEQDAQEVRQVIEESGQKAVLIPGDIRDEQFNYDLVEQAYQQLGGLDNVTLVAGHQQYHDDIHGFTTEAFTETFETNVYPLFWTVQKALEYLKPGASITTTSSVQGYNPSPILHDYAASKAAIISLTKSFSEELGPKGIRVNCVAPGPFWSPLQISGGQPQSKIP--TFGQKTPLGRAGQPVELCGTYVLLASEESSYTTGQVFGVSGGVQID |
4MOW Chain:B ((10-256)) | -------------------------------------------SKLAGKVAIVTGASKGIGAAIAKALADEGAAVVVNY-ASSKAGADAVVSAITEAGGRAVAVGGDVSKAADAQRIVDTAIETYGRLDVLVNNSGVYEFAP-IEAITEEHYRRQFDTNVFGVLLTTQAAVKHLGEGASIINISSVVTSITPPASAVYSGTKGAVDAITGVLALELGPRKIRVNAINPGMIVTEGTHSA---GSDLEAQVLGQ-TPLGRLGEPNDIASVAVFLASDDARWMTGEHLVVSGGLN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MOW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90483 for 2132 contacts (-42.4/contact) +
2D Compatibility (PS) -26145 + (NN) -12905 + (LL) 2132
1D Compatibility (HY) -12800 + (ID) 4350
Total energy: -144551.0 ( -67.80 by residue)
QMean score : 0.454
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