Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIRHIR-----------NATAVIEYG----GKRILIDPMLSDKGSFDPFPNSPRQDQKNPLVELPMAIEDIINDIDLVILTHLHIDHFDPKAIEVL-------PKDIKIYAQNEEDASEVERYG-----FT----NVSVFND--VTHIGEIELIKTDAQHGHGEILKMTGHVHGMILKHS-------------------------------------------------EEPTLYLAADTVWFEGVEKALKTYQPDVVVLNGGANQFFE---GGPLVMDEHDVLKVANTLPLAQIVVVHMEAVNHWHLSRKELNEFINSNDLGNRVVVPNDGELLTFEK |
| 2CBN Chain:A ((2-306)) | MNLIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQ---------------LLHTAFNP----GKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQG-IREFVETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLE--------CYGYRIEEHDAPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAALDLAK--GVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKG-CQHLLRECRSIF-P-ATELANDFTVFNV-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2CBN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -124418 for 1866 contacts (-66.7/contact) +
2D Compatibility (PS) -23682 + (NN) -4284 + (LL) 1368
1D Compatibility (HY) -7200 + (ID) 1650
Total energy: -159866.0 ( -85.67 by residue)
QMean score : 0.411
|
|
|