Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNKNKSYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAG----RSDYFWDLFIQMPAALMFPSGNKFYDW----IYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMETWDFAHCLPYFKKLEKT--YGAAPYDKFRGHDGPIKLKRGPATNPLFQSFFDAGVEA----GYHKTPDVNGFRQEGFGPFDSQVHRGRRMSASRAYLHPAMK-RKNLTVETRAFVTEIHYEGRRATGVTYKKNGKLHTIDANEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFEDHLEVYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNHFEGGGFVRSNNEVDYPNLMFHFLPI-AVRYDGQKAAVAHGYQVHVGPMYSNSRGSLKIKSKDPFEKPSIRFNYLSTEEDKKEWVEAIRVARNILSQKAMDPFNGGE-----ISPGP------EVQTDEEILD-WVRRDGETALHPSCSAKMGPASDPMAVVDPLTMKVHGMENLRVVDASAMPRTTNGNIHAPVLMLAEKAADIIRGRKPLEPQYIDYYKHGVHDENEGAIEVKPYAK |
4UDQ Chain:B ((6-527)) | -------FDYVIVGGGTAGSVLANRLSARPENRVLLIEAGIDTPENNIPPEIHDGLRPWLPRLSGDKFF-WPNLTIHRAAEHPGITREPQFYEQGRLLGGGSSVNMVVSNRGLPRDYDEW-QALGADGWDWQGVLPYFIKTERDADYGD---DPLHGNAGPIPIGRVDSRH--WSDFTVAATQALEAAGLPNIHDQNARFDDGYFPPAFTLKGEERFSAARGYLDASVRVRPNLSLWTESRVLKLLTTGNAITGVSVLRGRETLQVQAREVILTAGALQSPAILLRTGIGPAADLHALGIPVLADRPGVGRNLWEHSSIGVVAPLTEQARADAS-----------------TGKAGSRHQLG---IRASSGVDPATPSDLFLHIGADPVSGLASAV---FWVN----KPSSTGWLKLKDADPFSYPDVDFNLLSDPRDLGRLKAGLRLITHYFAAPSLAKYGLALALSRFAAPQPGGPLLNDLLQDEAALERYLRTNVGGVWHASGTARIGRADDSQAVVDK-AGRVYGVTGLRVADASIMPTVPTANTNLPTLMLAEKIADAI--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91638 for 4594 contacts (-19.9/contact) +
2D Compatibility (PS) -52579 + (NN) -19380 + (LL) 3564
1D Compatibility (HY) -25200 + (ID) 8750
Total energy: -193983.0 ( -42.23 by residue)
QMean score : 0.443
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