Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYSAIPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYEAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATS-IIFNSFHQYATYKDRILDKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVK---EHGLEGVSGLHFHTHCEQN-ADALCRTLEHVERHFKP---YLENMAWVNFGGGHHITRSD---YDVNLLIQTIKDFKERYHNTEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEM-PYRPSILKVSVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGS-FSFETPLKRGDKIVFQDMLHYTIVKNNSFNGVPLPSLAKIDSQGFKILKS-FSYEDYKNRN |
| 2QGH Chain:A ((28-417)) | ---FQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGEIQRALKA--GI-KPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQS--------LGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQGL-DLTIICEPGRSIVAESGELITQVLYEKK-NKRFVIVDAGMNDFLRPSLYHAKHAIRVITPS----------------EISPCDVVGPVCESSDTFLKDAHLP-ELEPGDKIAIEKVGAYGSSMASQYNSRPKLLELALED-KIRVIRKREALEDLWRLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QGH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194541 for 3148 contacts (-61.8/contact) +
2D Compatibility (PS) -38924 + (NN) -6394 + (LL) 2272
1D Compatibility (HY) -12800 + (ID) 3150
Total energy: -253537.0 ( -80.54 by residue)
QMean score : 0.397
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