Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSLFHLKFLKPLSCLQAGLLYSLIFGVLYHFPLFAYVYKESNQVSFIAMIIIVLFCVNGALFLALGLISAYLMRWSAIVFSWLNSVAFYFISAYKVFLNKSMMGNVLNTNTHEVLGFLSVKLFVFIVVFGVLPGYVIYKIPLKNSSKKAPFLAILALVFIFIASAFMNAKNWLWFDKHAKFIGGLILPFAYSVNAFRVSALKFFAPTIKPLPLFSPNHSHSFVVLVIGESARKSNYALYGYEKPTTPRLSKRLENHELTLFNATSCATYTTASLECILDSSFKNSLGAYENLPTYLTKAGVKVFWYSANDGEKNVKVTSYLKNYELIQKCPNCEAIAPYDESLLYNLPNLLKERSNENILLILHLAGSHGPNYDNKVPLNFRVFKPYCSSADLSSCSKESLINAYDNTIFYNDYLLDKIISMLENAKQPALMIYLSDHGESLGEGAYYLHGIPKSIAPKEQYEIPFILYANDLFKEKHSIIQTQTPINQNT-IFHSVLGVFEDFKTPSAVYRPSLDLLKHKKE |
3B9W Chain:A ((8-369)) | --------------------------------INEARLVAQYNYSINILAMLLVGFGFLMVFVRR-------------YGFSATTGTYLVVATGLPLYILLRANGI-FGHALTPHSVDAVIYAEFAVATGLIAMGAVLGRLR----------VFQYALLALFIVPVYLLNEWLVLDNASGLTEG-------------------------------FQDSAGSIAIHAFGAYFGLGVSIALT------TAAQR-----------------------------AQPIESDATSDRFSMLGSMVLWLFWPSFATA-------IVPFEQMPQTIVNTLLALCGATLATYFLSALFHKGKASIVDMANAALAGGVAIG---------------------SVCNIVGPVGAFVIGLLGGAISVVGFVFIQPMLESKAKTIDTC--------GVHNLHGLPGLLGGFSAILIV----PGIAVAQLTGIGITLALALIGGVIAGALIKLTGTTKQAYEDSHEFIHLAGPEDE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B9W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220919 for 3411 contacts (-64.8/contact) +
2D Compatibility (PS) -36702 + (NN) 1111 + (LL) 11848
1D Compatibility (HY) -2800 + (ID) 2200
Total energy: -249662.0 ( -73.19 by residue)
QMean score : 0.106
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