Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-M-LFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVNDAINHSSDAHLFLQDNRLLDRSLTLKDISFYRYHKASAPLIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENM-LDFALKLKAK-MLLISHDNLGLINDCLLNDFLLKSYQLDYKIAINLRGNNTAFYSVSLPYIELFNKRSNNPIVIFQQSLKELM-SFALK
2QMO Chain:A ((1-220))
GHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVNDAINHSSDAHLFLQDNRLLDRSLTLKDISFYRYHKVSAPLIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPIT-LEENMLDFALKLKAKMLLISHD-NLGLINDCLLNDFLLKSHQLDYKIAINLKGNNTAFHSISLPYIELFNTRSNNPIVIFQQSLKVL-MSFALK
General information:
TITO was launched using:
RESULT:
Template:
2QMO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154740 for 1719 contacts (-90.0/contact) +
2D Compatibility (PS) -23063 + (NN) -10351 + (LL) 308
1D Compatibility (HY) -29200 + (ID) 9950
Total energy: -226996.0 ( -132.05 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_2QMO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QMO-query.scw
PDB file :
Tito_Scwrl_2QMO.pdb
: