Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKVLYALMGFLLVFSALKADDFLEEANETAPANLNHPMQDLNAIQGSFFDKNRSKMSNTLNIDYFQGQTYKIRLRYAMATLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDSEGKIFSFYVFSTTFTSSKHPNLQVFIEDKNYYTNAFIKPQKENQENMSENAPKDAQKNNKPLKEEKEETKEKEEETIIIGDNTNAMKIIKKDIQKGYKALKSSQRKWYCLWACSKKSKLSLMPKEIFNDKQFTYFKF-DKRLALSKFPVIYKVV--DGYDNPVNTRIVGDYIIAEDVSTKWTLRLGKDYLCIRFVKRRKGE |
2N01 Chain:B ((1-106)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSHMNAKILKDRRYYYDYDYATRTKKS-WLIPSRVYDDGKFTYINMDLTRFPTGNFPAVFAREKEHAEDFLVNTTVEGNTLIVHGTYPFLVVRHGDNVVGLRRNKQK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2N01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43976 for 657 contacts (-66.9/contact) +
2D Compatibility (PS) -11280 + (NN) -1834 + (LL) 14996
1D Compatibility (HY) -3200 + (ID) 1200
Total energy: -46494.0 ( -70.77 by residue)
QMean score : 0.406
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