Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIERLVGNLRDLNPLDFNVDHVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTVSMPHSEPNFKVSLASDFKVVVK
3TJA Chain:C ((1-148))
MIIERLVGNLRDLNPLDFSVDYVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTV----------------------
General information:
TITO was launched using:
RESULT:
Template:
3TJA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60322 for 1042 contacts (-57.9/contact) +
2D Compatibility (PS) -15334 + (NN) -1904 + (LL) 1352
1D Compatibility (HY) -21600 + (ID) 7300
Total energy: -105108.0 ( -100.87 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_3TJA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TJA-query.scw
PDB file :
Tito_Scwrl_3TJA.pdb
: