Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQYALLFPGQGSQCIGMGKSFYESHTLAKELFERASNVLKVDMKKTLFE-ENELLKESAYTQPAIYLVSYIAYQLLNKQANGGLKPVFALGHSLGEVSAVSLSGALDFEKALKLTHQRGKMMQEACANKDASMMVVLGVSEESLLSLCQRTKNVWCANFNGGMQVVLAGVKDDLKALEPTLKEMGAKRVVFLEMSVASHCPFLEPMIFKFQELLEKSLKDKFHFEIISNATNEAYHNKSKAVELLSLQLTQPVRYQDCVKS-NNDRVDVFFELGCGSVLKGLNKRLSNK-PTISVGDNKGLDEAIEFLEEYV |
| 2CUY Chain:A ((2-301)) | --YAALFPGQGSHRVGMGRALYEASPAAKEVLDRAEAALPGLL-KLMWEGPEEALTLTENQQPALLAAGYAAYRAFLEAG--GKPPALAAGHSLGEWTAHVAAGTLELEDALRLVRLRGRYMQEAVPVGEGAMAAVLKLPLEEIQKALEGLEGVEIANLNAPEQTVISGRRQAVEEAAERLKERRA-RVVFLPVSAPFHSSLMAPARKRLAEDLAQVPLRRPRFPVYSNVTARPEEDPERIRALLLEQITAPVRWVEILRDMEARGVKRFLEFGSGEVLKGLVLRTLKEAEALSVQDPDSLRKALEVERA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195499 for 2755 contacts (-71.0/contact) +
2D Compatibility (PS) -31770 + (NN) -9840 + (LL) 512
1D Compatibility (HY) -12800 + (ID) 5250
Total energy: -254647.0 ( -92.43 by residue)
QMean score : 0.551
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