Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MAFKVVQICGGLGNQMFQYAFAKSLQKHSNTPVLLDITSFDGSNRKMQ--LELFPIDLPYASAKEIAIAKMQ---------HLPKLVRDALKYMGFDRVSQEIVFEYEPKLLKPSRLTYFYGYFQDPRYFDAISSLIKQTFTLPPPPENGNNKKKEEEYHRKLSLILAAKNSVFAHIRRGDYVGIGCQLGIDYQKKAVEYMAKRVPNMELFVFCEDLKFTQNLDLGYPFM------DMTTRDKDEEAYWDMLLMQSCKHGIIANSTYSWWAAYLINNPGKIIIGPKHWLFGHENILCKEWVKIESHFEVKSQKYNA |
| 2HHC Chain:A ((2-317)) | TKERFVISRRRTGFGDCLWSLASAWSYAQRTGRTLVIDWRGSCYVEQPFSNAFPAFFEPVEDIAGVPVICDDRVNQLSFPGPFFPRWWNRPSIDCINRPDEQIFRERDELTELFQAREDSEANTIVCDACLMWRCSEEAERLIFRNIKLRSEIRARIDALYEEHFS----GHSIIGVHVRHWADSELALHQVCMAIRKAKA--LSYPKPVKVFLCTDSAQVLDQVSGLFPDVFAVPKSAEMGIEGGASALIDMYLLARCATVIRFPPTSAFTRYARLLVPRIIEFDNPGHLTMIDNP--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98304 for 2104 contacts (-46.7/contact) +
2D Compatibility (PS) -28933 + (NN) -5916 + (LL) 2940
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: -136563.0 ( -64.91 by residue)
QMean score : 0.280
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