Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKPKKNTLPCSLSVKMSYFMRLLIKWRTRSLSHKMMTLVQILSILALASKASEDLEEQLKKIKDYIYKTLNAKIASDVYDRVLILVNEYCANEELFDKESVKISDLLIQDIQLYAL--VDEMLKEDKYQVQHTILKGIIKRKYDEAYSLNSEDRILLEYQERLLEPSYASFSNKKFK |
1PU1 Chain:A ((1-91)) | -------------------------------------------------MSLRKLTEGDLDEISSFLHNTISDFILKRV-SAKEIVDIDITVLVEYTDELKVDISAELYLDELSDADPGIVDEAVDAAYRSLESFLDGFRE------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PU1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5271 for 541 contacts (-9.7/contact) +
2D Compatibility (PS) -9292 + (NN) -207 + (LL) 7380
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -9890.0 ( -18.28 by residue)
QMean score : 0.262
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